The detailed information of tRNA gene sequence


Sequence ID>A171006709
Genome IDCP016070
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HTSR1 [CP016070]
Start position on genome 1415324
End posion on genome 1415239
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gattagctgc
tRNA gene sequence 
GCCGAGGTAGCCTAGCCCGGCCAAGGCGGTTGCTTCGAGAGCAACTGTCCGTCAGGACTC
GTGCGTTCAAATCGCACCCTCGGCGCtt
Downstream region at tRNA end position 
ttctacaggc
Secondary structure (Cloverleaf model)
>A171006709	Ser	CGA
                   c      GCtt ttctacaggc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C G C     A
    C C G A        A      | | | | |     A
  C         T C C G       G T G C G     C
  G         | | | |                 T T
  G         A G G C
    C C A          G     TGTCCGTCAGGACTC
                    G - C
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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