The detailed information of tRNA gene sequence


Sequence ID>A171006713
Genome IDCP016070
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HTSR1 [CP016070]
Start position on genome 724434
End posion on genome 724351
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgaacgcgc
tRNA gene sequence 
GTCGTGGTAGCCTAGCCTGGTCAAGGCGCAGGGTTGCTAACTCTGTGGCGTAAGCCTCCG
GGGTTCAAATCCCCGCCACGACGCtt
Downstream region at tRNA end position 
tcgatatcca
Secondary structure (Cloverleaf model)
>A171006713	Ser	GCT
                   c      GCtt tcgatatcca
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G C C C C     A
    C C G A        A      | | | | |     A
  T         T C C G       C G G G G     C
  G         | | | |                 T T
  G         A G G C
    T C A          G     TGGCGTAAGCCTC
                    C - G
                    A - T
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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