The detailed information of tRNA gene sequence


Sequence ID>A171006722
Genome IDCP016070
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HTSR1 [CP016070]
Start position on genome 100588
End posion on genome 100516
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
atgcgggcaa
tRNA gene sequence
GGGACCGTAGGGTAGCTTGGTATCCTTCGAGCTTTGGGTGCTCGTGACCCCGGTTCAAAT
CCGGGCGGTCCCAtgg
Downstream region at tRNA end position
acctttttca
Secondary structure (Cloverleaf model)
>A171006722	Pro	TGG
                   a      Atgg acctttttca
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     G G G C C     A
      C G A        A      | | | | |     A
    T       T G G G       C C C G G     C
    T         | | +                 T T
    G       T C C T
      G T A        T     TGAC
                    C - G
                    G - C
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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