The detailed information of tRNA gene sequence


Sequence ID>A171006733
Genome IDCP016804
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HSR6 [CP016804]
Start position on genome 1166485
End posion on genome 1166559
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
caggatttgc
tRNA gene sequence 
GGGCGTTTAGCTCAGCTTGGACAGAGCACTTGGCTTCGGACCAAGGGGTCGCGGGTTCAA
ATCCTGCAACGCCCAtcc
Downstream region at tRNA end position 
ttctgcgtga
Secondary structure (Cloverleaf model)
>A171006733	Arg	TCG
                   c      Atcc ttctgcgtga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     T - A          T A
                    T     C G T C C     A
    T C G A        A      | | + | |     A
  T         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    A C A          A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.-

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