The detailed information of tRNA gene sequence


Sequence ID>A171006734
Genome IDCP016804
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalodesulfurarchaeum formicicum HSR6 [CP016804]
Start position on genome 1225438
End posion on genome 1225512
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gatcggctgc
tRNA gene sequence 
GCCGCGGTAGCTCAGCCTGGTAGAGCAGTTGATTTGTAATCAACTGGTCGAGGGTTCGAA
TCCCTCCCGCGGCTCtc
Downstream region at tRNA end position 
ttctaaatac
Secondary structure (Cloverleaf model)
>A171006734	Thr	TGT
                   c      TCtc ttctaaatac
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     G
    C       C T C G       G A G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     TGGTC
                    G - C
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.-

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