The detailed information of tRNA gene sequence


Sequence ID>A171006814
Genome IDCP017921
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanohalophilus halophilus Z-7982 [CP017921]
Start position on genome 1172174
End posion on genome 1172097
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cattttttat
tRNA gene sequence 
GGGCCTATAGCTTAGTCTGGTTAGAGCGCTCGGCTCATAACCGAGCGATCACCGGTTCGA
ATCCGGTTAGGCCCACCA
Downstream region at tRNA end position 
taatatttta
Secondary structure (Cloverleaf model)
>A171006814	Met	CAT
                   t      ACCA taatatttta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     T G G C C     A
    C T G A        A      | | | | |     G
  T         T T C G       A C C G G     C
  G         + | | |                 T T
  G         G A G C
    T T A          G     CGATC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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