The detailed information of tRNA gene sequence


Sequence ID>A171006874
Genome IDCP019067
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorientalis sp. IM1011 [CP019067]
Start position on genome 2244349
End posion on genome 2244276
Amino Acid Pseudo
Anticodon TGG
Upstream region at tRNA start position 
aactatccgt
tRNA gene sequence 
GGGTCGCTAGTGTAGCGGCCGAATATCTGGCGTTTGGGACGCCAGGCCAGTGGTTCGAAT
CCACTGTGACCCACtt
Downstream region at tRNA end position 
ctgccgcggc
Secondary structure (Cloverleaf model)
>A171006874	Pseudo	TGG
                   t      ACtt ctgccgcggc
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G + T
                     C - G          T A
                    T     T C A C C     A
      C G A        A      | | | | |     G
    G       T G T G       A G T G G     C
    G       | + | +                 T T
    C       A T A T
      C G A        C     GGCC
                    T - A
                    G - C
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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