The detailed information of tRNA gene sequence


Sequence ID>A171006876
Genome IDCP019067
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorientalis sp. IM1011 [CP019067]
Start position on genome 2243830
End posion on genome 2243749
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ccatacccac
tRNA gene sequence 
TCCGCGGTAGCTAAGTGGCCGAAGGCGGCGAGCTTAAGACTCGCTACGTAGGTATTCGAG
GGTTCGAATCCCTCCCGCGGTAtgc
Downstream region at tRNA end position 
gccgccatgt
Secondary structure (Cloverleaf model)
>A171006876	Leu	TAA
                   c      Atgc gccgccatgt
                     T   T
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A T C G       G A G G G     C
    G         + | |                 T T
    C       A G G C
      C G A        G     TACGTAGGTATTC
                    G - C
                    C - G
                    G - C
                    A - T
                    G - C
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.-

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