The detailed information of tRNA gene sequence


Sequence ID>A171006944
Genome IDCP019285
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalobiforma lacisalsi AJ5 [CP019285]
Start position on genome 478335
End posion on genome 478261
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ggaaaagcgc
tRNA gene sequence 
GGGCCGGTAGCTCAATTAGGTTGAGCGCCACTCTGATAAGGTGGAGGTTCTCGGTTCAAA
TCCGAGCCGGCCCACtt
Downstream region at tRNA end position 
ctctccgcga
Secondary structure (Cloverleaf model)
>A171006944	Ile	GAT
                   c      ACtt ctctccgcga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G A G C C     A
      T A A        A      | | | | |     A
    T       C T C G       C T C G G     C
    A       | | | |                 T T
    G       G A G C
      G T T        G     AGGTT
                    C - G
                    C - G
                    A - T
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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