The detailed information of tRNA gene sequence


Sequence ID>A171007038
Genome IDCP020477
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidianus manzaensis YN-25 [CP020477]
Start position on genome 1652553
End posion on genome 1652628
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
agtatttcat
tRNA gene sequence 
GGGCCCGTCGTCTAGCCTGGTTAGGACGCTACCCTCACACGGTAGTAATCCTGGGTTCAA
ATCCCAGCGGGCCCACtg
Downstream region at tRNA end position 
tggatgtggg
Secondary structure (Cloverleaf model)
>A171007038	Val	CAC
                   t      ACtg tggatgtggg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       C T G G G     C
  G         + | | |                 T T
  G         G G A C
    T T A          G     TAATC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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