The detailed information of tRNA gene sequence


Sequence ID>A171007124
Genome IDCP021848
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus sp. 5-4 [CP021848]
Start position on genome 62139
End posion on genome 62062
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gggcgggcat
tRNA gene sequence 
GGGGCCGTGGGGTAGCTTGGCCTATCCTTCCGGCTTCGGGAGCCGGGGACCCGAGTTCGA
ATCTCGGCGGCCCCACCA
Downstream region at tRNA end position 
gaaaacaaac
Secondary structure (Cloverleaf model)
>A171007124	Pro	CGG
                   t      ACCA gaaaacaaac
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C T C     A
    T C G A        G      | | | | |     G
  T         T G G G       C C G A G     C
  G           | | +                 T T
  G         T C C T
    C C T A        T     GGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.-

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