The detailed information of tRNA gene sequence


Sequence ID>A171007144
Genome IDFR746099
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloquadratum walsbyi C23 DSM 16854 [FR746099]
Start position on genome 537606
End posion on genome 537680
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgcatatga
tRNA gene sequence 
GGGCCCTTAGCTCAGCCTGGTGAGAGCGCTCGGCTCATAACCGAGTGGTCGTTGGTTCGA
ATCCGACAGGGCCCAttc
Downstream region at tRNA end position 
ttatttttat
Secondary structure (Cloverleaf model)
>A171007144	Met	CAT
                   a      Attc ttatttttat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C A G C C     A
    C C G A        A      | | + | |     G
  T         C T C G       G T T G G     C
  G         | | | |                 T T
  G         G A G C
    T G A          G     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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