The detailed information of tRNA gene sequence


Sequence ID>A171007224
Genome IDHF571520
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorhabdus tiamatea SARL4B type strain: SARL4B [HF571520]
Start position on genome 332957
End posion on genome 333040
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
ccacgggtaa
tRNA gene sequence 
GCGCGGGTAGCCAAGCCAGGAAAAGGCGTAGCGCTTAGGACGCTATCCCGTAGGGGTCCG
CCGGTTCAAATCCGGTCCCGCGCAttt
Downstream region at tRNA end position 
tgcggcgaac
Secondary structure (Cloverleaf model)
>A171007224	Leu	TAG
                   a      Attt tgcggcgaac
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     T G G C C     A
    C C G A        A      + | | | |     A
  A         A C C G       G C C G G     C
  G           | | |                 T T
  G         A G G C
    A A A          G     TCCCGTAGGGGTCC
                    T - A
                    A - T
                    G - C
                    C - G
                    G - C
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.-

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