The detailed information of tRNA gene sequence


Sequence ID>A171007233
Genome IDHF571520
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorhabdus tiamatea SARL4B type strain: SARL4B [HF571520]
Start position on genome 1745651
End posion on genome 1745725
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcggggacga
tRNA gene sequence 
GGGCCCGTATCTCAGTCTGGTTAGAGAGAGCGGCTCATAACCGCTTCGTCCTTGGTTCAA
ATCCGAGCGGGCCCAtcc
Downstream region at tRNA end position 
agattttgca
Secondary structure (Cloverleaf model)
>A171007233	Met	CAT
                   a      Atcc agattttgca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A G C C     A
    C T G A        A      | | + | |     A
  T         C T C T       C T T G G     C
  G         | | | |                 T T
  G         G A G A
    T T A          G     TCGTC
                    A - T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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