The detailed information of tRNA gene sequence


Sequence ID>A171007239
Genome IDHF571520
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorhabdus tiamatea SARL4B type strain: SARL4B [HF571520]
Start position on genome 2173727
End posion on genome 2173812
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cggagcatga
tRNA gene sequence 
GCCGAGGTAGCCTAGCCTGGCCAAGGCGCCTGCCTCGAGAGCAGGTGTCCTCACGGACTC
GGGAGTTCAAATCTCCCCCTCGGCGCtt
Downstream region at tRNA end position 
ctcgcgaact
Secondary structure (Cloverleaf model)
>A171007239	Ser	CGA
                   a      GCtt ctcgcgaact
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
    C C G A        A      | | | | |     A
  T         T C C G       G G G A G     C
  G         | | | |                 T T
  G         A G G C
    C C A          G     TGTCCTCACGGACTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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