The detailed information of tRNA gene sequence


Sequence ID>A171007250
Genome IDHF571520
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorhabdus tiamatea SARL4B type strain: SARL4B [HF571520]
Start position on genome 2013113
End posion on genome 2013039
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcgctcacct
tRNA gene sequence 
GGGCCAATAGCTCAATCAGGTTGAGCGCTCGGCTGATAACCGGGAGGCTACCGGTTCAAA
TCCGGTTTGGCCCACta
Downstream region at tRNA end position 
taccaccttt
Secondary structure (Cloverleaf model)
>A171007250	Ile	GAT
                   t      ACta taccaccttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T          T A
                    T     T G G C C     A
      T A A        A      | | | | |     A
    C       C T C G       A C C G G     C
    A       | | | |                 T T
    G       G A G C
      G T T        G     AGGCT
                    C - G
                    T + G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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