The detailed information of tRNA gene sequence


Sequence ID>A171007251
Genome IDHF571520
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorhabdus tiamatea SARL4B type strain: SARL4B [HF571520]
Start position on genome 1957570
End posion on genome 1957500
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
atcgaatcac
tRNA gene sequence 
GGGACCGTAGGGTAGCGGTATCCTCGGCGCATGGGGTGCGTCGGACCCGAGTTCGAATCT
CGGCGGCCCCAtcc
Downstream region at tRNA end position 
atttgctgcg
Secondary structure (Cloverleaf model)
>A171007251	Pro	GGG
                   c      Atcc atttgctgcg
                     G - C
                     G - C
                     G - C
                     A   C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C T C     A
        G A        A      | | | | |     G
      C     T G G G       C C G A G     C
      G       | | +                 T T
      G     T C C T
        T A        C     GGAC
                    G - C
                    G + T
                    C - G
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.-

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