The detailed information of tRNA gene sequence


Sequence ID>A171007259
Genome IDHF571520
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorhabdus tiamatea SARL4B type strain: SARL4B [HF571520]
Start position on genome 1162089
End posion on genome 1162007
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ggatggatgc
tRNA gene sequence 
GCGAGGGTGGCTGAGCGGCCAAAGGCGGCGGGCTTAAGACCCGCTCCCGAAGGGGTCCAG
GGGTTCGAATCCCCTCCCTCGCAtct
Downstream region at tRNA end position 
gcgacgaacg
Secondary structure (Cloverleaf model)
>A171007259	Leu	TAA
                   c      Atct gcgacgaacg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       G T C G       A G G G G     C
    G         + | |                 T T
    C       A G G C
      C A A        G     TCCCGAAGGGGTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.-

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