The detailed information of tRNA gene sequence


Sequence ID>A171007261
Genome IDHF571520
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorhabdus tiamatea SARL4B type strain: SARL4B [HF571520]
Start position on genome 433967
End posion on genome 433894
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ttcccagcca
tRNA gene sequence 
GGACGCGTGGCCTAGGGGATAGGGCGAGAGGTTCCTAACCTCTCGATCGCGGGTTCGAAT
CCCGCCGCGTCCGCtt
Downstream region at tRNA end position 
cgttcctcac
Secondary structure (Cloverleaf model)
>A171007261	Arg	CCT
                   a      GCtt cgttcctcac
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
      G G A        G      | | | | |     G
    G       T C C G       G C G G G     C
    G       + | | |                 T T
    A       G G G C
      T A          G     CGATC
                    A - T
                    G - C
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.-

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