The detailed information of tRNA gene sequence


Sequence ID>A171007310
Genome IDHG425166
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobacterium sp. MB1 [HG425166]
Start position on genome 1123753
End posion on genome 1123823
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atcgtttttt
tRNA gene sequence 
GCCGAGATGACCGAGTGGCTAGGTGCGTGGCTGCAGACCACGATACTTGGGTTCAAATCC
CAATCTCGGCCtct
Downstream region at tRNA end position 
tatttatcaa
Secondary structure (Cloverleaf model)
>A171007310	Cys	GCA
                   t      Ctct tatttatcaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A A C C C     A
        G A        G      | | | | |     A
      T     G C C A       T T G G G     C
      G       | | |                 T T
      G     A G G T
        C T        G     ATAC
                    C - G
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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