The detailed information of tRNA gene sequence


Sequence ID>A171007441
Genome IDLN831302
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalobacterium hubeiense JI20-1 [LN831302]
Start position on genome 1611008
End posion on genome 1611092
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgaaagcgt
tRNA gene sequence 
GTCGTGGTAGCCTAGCCTGGTCAAGGCGCAGGGTTGCTAACTCTGTGGCGCAAGCCTCCG
GGGTTCAAATCCCCGCCACGACGCCt
Downstream region at tRNA end position 
ttccacaaca
Secondary structure (Cloverleaf model)
>A171007441	Ser	GCT
                   t      GCCt ttccacaaca
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G C C C C     A
    C C G A        A      | | | | |     A
  T         T C C G       C G G G G     C
  G         | | | |                 T T
  G         A G G C
    T C A          G     TGGCGCAAGCCTC
                    C - G
                    A - T
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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