The detailed information of tRNA gene sequence


Sequence ID>A172000054
Genome IDCP019067
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalorientalis sp. IM1011 [CP019067]
Start position on genome 2244272
End posion on genome 2244190
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acccacttcT
tRNA gene sequence 
GCCGCGGCTGGGAACTGGTAATCCCGCTCGCCTGCTACGCGAGCTCCGAGAGGACTCCCG
GTTCGACTCCGGGCCGCGGCGTtc
Downstream region at tRNA end position 
gcgggtgctg
Secondary structure (Cloverleaf model)
>A172000054	Ser	GCT
                   T      GTtc gcgggtgctg
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T C
                    C     G G G C C     A
      T C A        T      | | | | |     G
    G       A G G G       C C C G G     C
    G       | | | |                 T T
    T       T C C C
      A A          G     CTCCGAGAGGACT
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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