The detailed information of tRNA gene sequence


Sequence ID>A17A000032
Genome IDAP012489
Search identical group
Phylum/ClassThermoproteota
SpeciesAeropyrum camini SY1 = JCM 12091 [AP012489]
Start position on genome 282701
End posion on genome 282574
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatacagggc
tRNA gene sequence 
GCCGCCGTAGCTCAGCCTGGCAGAGCGCCGGACTCGAGATCCGGAGGTCCCGGGTTCGAA
TCCCGGCGGCGGCACCA
Downstream region at tRNA end position 
accccaagca
Secondary structure (Cloverleaf model)
>A17A000032	Ser	CGA
                   c      ACCA accccaagca
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C*G A
intron: position=35, length=51 (in A-loop)
ATACGGCCCGGCTACAATCACTCTCCAGGCCGAAGTCGCCTGGGGGCCTGG
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK