The detailed information of tRNA gene sequence


Sequence ID>A17A000060
Genome IDCP001014
Search identical group
Phylum/ClassThermoproteota
SpeciesPyrobaculum neutrophilum V24Sta [CP001014]
Start position on genome 185974
End posion on genome 185865
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atctgtgacg
tRNA gene sequence 
GGGCCCGTAGCTTAGCCCGGCAGAGCGCCCATCTCATAACCGGGAAGTCCCGGGTTCAAA
TCCCGGCGGGCCCACta
Downstream region at tRNA end position 
tctttaaaac
Secondary structure (Cloverleaf model)
>A17A000060	Met	CAT
                   g      ACta tctttaaaac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       T T C G       C C G G G     C
    C       + | | |                 T T
    G       G A G C
      G C A        G     AAGTC
                    C - G
                    C - G
                    C - G
                    A   C
                   *T   C
                  C       A
                  T       A
                    C A T
intron: position=32, length=35
GGGCCTGGCCCAGCCGGGGCTGGTCCAGCGTAAGG
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK