The detailed information of tRNA gene sequence


Sequence ID>A17A000096
Genome IDCP001338
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosphaerula palustris E1-9c [CP001338]
Start position on genome 2241311
End posion on genome 2241416
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
agggcagtga
tRNA gene sequence 
CCCGCCTTAACTCAGACTGGTAGAGTGCGCGGCTGTAGTCCGCGATGTCCCCGGTTCGAT
TCCGGGAGGCGGGACat
Downstream region at tRNA end position 
ctgagaaaac
Secondary structure (Cloverleaf model)
>A17A000096	Tyr	GTA
                   a      ACat ctgagaaaac
                     C - G
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T T
                    T     G G G C C     A
      A G A        A      | | | | |     G
    C       C T C A       C C C G G     C
    T       | | | |                 T T
    G       G A G T
      G T A        G     ATGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T *
                  T       G
                    G T A
intron: position=39, length=31 (in A-loop)
ATGATTTACCGTTCAGGTAAACGCGCGGCTA
Intron
Comment/Decision
Genome/Seq. Info.-

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