The detailed information of tRNA gene sequence


Sequence ID>A17A000251
Genome IDCP001710
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanothermobacter marburgensis str. Marburg [CP001710]
Start position on genome 1517921
End posion on genome 1517777
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
tctatcaaaT
tRNA gene sequence
GGGGTCATGGTGTAACCAGGCTATCATCTGGGACTCCAAATCCTAGGATCTGGGTTCAAA
TCCCAGTGACCCCATCa
Downstream region at tRNA end position
ctcccttttt
Secondary structure (Cloverleaf model)
>A17A000251	Trp	CCA
                   T      ATCa ctcccttttt
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T          T A
                    T     G A C C C     A
    C C A A        G      | | | | |     A
  A         T G T G       C T G G G     C
  G           | | +                 T T
  G         T C A T
    C T A          C     GGAT
                    T - A
                    G + T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C*A
intron: position=36, length=68 (in A-loop)
AGTTGTCTTTGAAGAAAATGCGCGCTCTGACTACAGTATGATGACCGATTGGAGTACTGAGACAAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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