The detailed information of tRNA gene sequence


Sequence ID>A17A000350
Genome IDCP001939
Search identical group
Phylum/ClassThermoproteota
SpeciesThermosphaera aggregans DSM 11486 [CP001939]
Start position on genome 1050155
End posion on genome 1050045
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tagagagaag
tRNA gene sequence 
GCCGCCGTAGCTCAGCTCGGCTAGAGCGCCGGACTCGAGATCCGGTTGCCCCGGGTTCAA
ATCCCGGCGGCGGCACtt
Downstream region at tRNA end position 
ctaactagaa
Secondary structure (Cloverleaf model)
>A17A000350	Ser	CGA
                   g      ACtt ctaactagaa
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    T C G A        A      | | | | |     A
  C         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     TTGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C*G A
intron: position=35, length=35 (in A-loop)
ATACGGGTTGTAAACCGTGGTCGCGAAGCCCAGGG
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK