The detailed information of tRNA gene sequence


Sequence ID>A17A000489
Genome IDCP002363
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus mucosus DSM 2162 [CP002363]
Start position on genome 4264
End posion on genome 4505
Amino Acid Pyl
Anticodon CTA
Upstream region at tRNA start position 
gtattgagga
tRNA gene sequence 
AGCCGGGTCGTCTAGCGGCCAAGGATGCGGGGCTCTAGCCCCCGTGACCGGGGTTCGAAT
CCCCGCCCGGCTACCt
Downstream region at tRNA end position 
ttacttccac
Secondary structure (Cloverleaf model)
>A17A000489	Pyl	CTA
                   a      ACCt ttacttccac
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     G C C C C     A
      C G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | +                 T T
    C       G G A T
      C A A        G     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       C
                  T       G
                    C T*A
intron: position=36, length=167 (in A-loop)
GGCCCACCCCCGGCCGCCTGACCCTTCTAAGCCAGCCCAGTCAACACCTAGGGTGGGTTCCTGCGACCCT
ATGAACAGATTCCCGGAGGATGCCTGGTGCATGTGGAAAAACTTAAAAGCCCGGCTACCGGATTATTAGG
GTAGGGTCAGGCGGCCGCGGTGGGGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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