The detailed information of tRNA gene sequence


Sequence ID>A17A000490
Genome IDCP002363
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus mucosus DSM 2162 [CP002363]
Start position on genome 35291
End posion on genome 35394
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tgaaaccggt
tRNA gene sequence 
GCGGGGGTGCCCGAGCTTGGCCAAAGGGGGCGGACTCGAGATCCGCTGGTGTAGGCCTGC
GTGGGTTCAAATCCCACCCCCCGCACCt
Downstream region at tRNA end position 
ccatcctcct
Secondary structure (Cloverleaf model)
>A17A000490	Ser	CGA
                   t      ACCt ccatcctcct
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     A
  T         G C C C       G T G G G     C
  G           | | |                 T T
  G         A G G G
    C C A A        G     TGGTGTAGGCCTGC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C*G A
intron: position=35, length=17 (in A-loop)
AAGGCTTAGCCCAGGGG
Intron
Comment/Decision
Genome/Seq. Info.-

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