The detailed information of tRNA gene sequence


Sequence ID>A17A000550
Genome IDCP002588
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus veneficus SNP6 [CP002588]
Start position on genome 881457
End posion on genome 881356
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position
aaaatcccaa
tRNA gene sequence
GCGGGGGTTGCCGAGCCAGGAAAAGGCGCAGGGCTTAAAACCCTGTCCCGAAGGGGTCCG
CGGGTTCAAATCCCGCCCCCCGCAtat
Downstream region at tRNA end position
attctggagt
Secondary structure (Cloverleaf model)
>A17A000550	Leu	TAA
                   a      Atat attctggagt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        T      | | | | |     A
  A         G C C G       G C G G G     C
  G           | | |                 T T
  G         A G G C
    A A A          G     TCCCGAAGGGGTCC
                    C - G
                    A - T
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T A*A
intron: position=36, length=18 (in A-loop)
AGACCCCACCGGGGTAAG
Intron
Comment/Decision
Genome/Seq. Info.-

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