The detailed information of tRNA gene sequence


Sequence ID>A17A000595
Genome IDCP002817
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus acidocaldarius N8 [CP002817]
Start position on genome 458932
End posion on genome 458838
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
taataataaT
tRNA gene sequence 
GCCGCCGTAGCTCAGCCCGGGAGAGCGCCCGGCTGATGACCGGGTTGTCCGGGGTTCAAG
TCCCCGCGGCGGCATCa
Downstream region at tRNA end position 
cggcttatac
Secondary structure (Cloverleaf model)
>A17A000595	Ile	GAT
                   T      ATCa cggcttatac
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G C C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C G G G G     C
    C       | | | |                 T T
    G       G A G C
      G G A        G     TTGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    G A*T
intron: position=36, length=18 (in A-loop)
AGTTTTTAATACTCGCAG
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK