The detailed information of tRNA gene sequence


Sequence ID>A17A000940
Genome IDCP003531
Search identical group
Phylum/ClassThermoproteota
SpeciesThermogladius calderae 1633 [CP003531]
Start position on genome 409641
End posion on genome 409543
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatctacggt
tRNA gene sequence 
GCGGGGGTGCCCGAGCCAGGCCAAAGGGGGCGGACTCGAGATCCGCTGGTGTAGGCCTGC
GTGGGTTCAAATCCCACCCCCCGCACta
Downstream region at tRNA end position 
agctggagga
Secondary structure (Cloverleaf model)
>A17A000940	Ser	CGA
                   t      ACta agctggagga
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C C G A        G      | | | | |     A
  A         G C C C       G T G G G     C
  G           | | |                 T T
  G         A G G G
    C C A A        G     TGGTGTAGGCCTGC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C*G A
intron: position=35, length=13 (in A-loop)
AAGTAGCCCAGGG
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK