The detailed information of tRNA gene sequence


Sequence ID>A17A001015
Genome IDCP005290
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus sulfaticallidus PM70-1 [CP005290]
Start position on genome 309749
End posion on genome 309613
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctggtattga
tRNA gene sequence 
GGGGTCGTGGCGTAGCCAGGAAGCGCGGCGGGCTCCAGACCCGCCAGTCGTGGGTTCAAA
TCCCACCGACCCCACta
Downstream region at tRNA end position 
ttgttttttc
Secondary structure (Cloverleaf model)
>A17A001015	Trp	CCA
                   a      ACta ttgttttttc
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    C       T G C G       G T G G G     C
    A       + | | |                 T T
    G       G C G C
      G A A        G     CAGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    C C*A
intron: position=36, length=62 (in A-loop)
AGCGGTGTGATGAATGATGGGTCTGCTGAGCTGTGATGACCCGTTGGAGCGCTGACCCGAAG
Intron
Comment/Decision
Genome/Seq. Info.-

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