The detailed information of tRNA gene sequence


Sequence ID>A17A001017
Genome IDCP005290
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus sulfaticallidus PM70-1 [CP005290]
Start position on genome 1830011
End posion on genome 1829901
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatcttgcaa
tRNA gene sequence 
GCCGGGGTGGCAGAGAGGCACTGCGGTGGACTCGAGATCCACTGCCCGAAAGGGCACCTG
GGTTCAAGTCCCAGCCCCGGCGtgc
Downstream region at tRNA end position 
ttccttttgg
Secondary structure (Cloverleaf model)
>A17A001017	Ser	CGA
                   a      Gtgc ttccttttgg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     G A C C C     A
        G A        G      | | | | |     A
      A     G A C G       C T G G G     C
      G     | | | |                 T T
      G     C T G C
        C A        G     TGCCCGAAAGGGCAC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C G*A
intron: position=36, length=29 (in A-loop)
AGTCCGTGGTTGAAGATACCACGGAAGGG
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK