The detailed information of tRNA gene sequence


Sequence ID>A17A001064
Genome IDCP006646
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum adornatum 1910b [CP006646]
Start position on genome 559033
End posion on genome 558931
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position
taaacaaagg
tRNA gene sequence
GGGCCGGTCGTCTAGTGGGAGGATGCCGCCTTTGCAAGGCGGTGGTCCCGGGTTCGAATC
CCGGCCGGTCCACCA
Downstream region at tRNA end position
tttttctgac
Secondary structure (Cloverleaf model)
>A17A001064	Ala	TGC
                   g      ACCA tttttctgac
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
        G A        C      | | | | |     G
      T     T C T G       C C G G G     C
      G     + | | +                 T T
      G     G G A T
        G A        G     TGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A *
                  T       A
                    T G C
intron: position=39, length=28 (in A-loop)
GGACCATGAAAGTTGGGGTTCCGAGAAC
Intron
Comment/Decision
Genome/Seq. Info.-

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