The detailed information of tRNA gene sequence


Sequence ID>A17A001068
Genome IDCP006646
Search identical group
Phylum/ClassThermoproteota
SpeciesThermofilum adornatum 1910b [CP006646]
Start position on genome 679286
End posion on genome 679183
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttatttctta
tRNA gene sequence 
GCCGGGGTGGCCGAGCGGACCAAGGCGGTGGACTCGAGATCCACTACCCCAAAAGGGTGC
CCGGGTTCAAATCCCGGCCCCGGCGCCA
Downstream region at tRNA end position 
ttctacctct
Secondary structure (Cloverleaf model)
>A17A001068	Ser	CGA
                   a      GCCA ttctacctct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     A
    G       G C C G       C C G G G     C
    G         | | |                 T T
    A       A G G C
      C C A        G     TACCCCAAAAGGGTGC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C*      A
                  T       G
                    C G A
intron: position=33, length=16 (in A-loop)
ACCCCAAAAGCCACAC
Intron
Comment/Decision
Genome/Seq. Info.-

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