The detailed information of tRNA gene sequence


Sequence ID>A17A001287
Genome IDCP009961
Search identical group
Phylum/ClassThermoproteota
SpeciesInfirmifilum uzonense 1807-2 [CP009961]
Start position on genome 1272439
End posion on genome 1272542
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
atgatcacta
tRNA gene sequence 
GCGGGGGTGCCCGAGCTAGGTCAAAGGGGGCGGTCTCAGGCTCCGCTGGCGTCGGCCTGC
CCGGGTTCGAATCCCGGCCCCCGCACta
Downstream region at tRNA end position 
gcccatctct
Secondary structure (Cloverleaf model)
>A17A001287	Leu	CAG
                   a      ACta gcccatctct
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
    T C G A        G      | | | | |     G
  A         G C C C       C C G G G     C
  G           | | |                 T T
  G         A G G G
    T C A A        G     TGGCGTCGGCCTGC
                    G - C
                    C - G
                    G - C
                    G - C
                    T   T
                  C*      C
                  T       G
                    C A G
intron: position=33, length=18 (in A-loop)
CCTATGAGGGGCCCACAC
Intron
Comment/Decision
Genome/Seq. Info.-

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