The detailed information of tRNA gene sequence


Sequence ID>A17A001320
Genome IDCP010834
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobrevibacter sp. YE315 [CP010834]
Start position on genome 2064815
End posion on genome 2064666
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgttatgtaT
tRNA gene sequence 
GGGGTTATGGTGTAACCTGGCATCATCTGGGACTCCAAATCCCAGGATCGGGGTTCAAAT
CCCTGTGACCCCATtt
Downstream region at tRNA end position 
tctataaaac
Secondary structure (Cloverleaf model)
>A17A001320	Trp	CCA
                   T      ATtt tctataaaac
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T + G
                     A - T          T A
                    T     G T C C C     A
      C A A        G      | + | | |     A
    C       T G T G       C G G G G     C
    T         | | +                 T T
    G       T C A T
      G C A        C     GGAT
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C*A
intron: position=36, length=75 (in A-loop)
AGTTGTCTTTGAAGAAATATACGCGTAACTGAACAGTATCCGTTGTGATGATCAATTGGAGTACTGAGGC
AAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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