The detailed information of tRNA gene sequence


Sequence ID>A17A001332
Genome IDCP011055
Search identical group
Phylum/ClassThermoproteota
SpeciesSaccharolobus solfataricus SARC-B [CP011055]
Start position on genome 1678725
End posion on genome 1678635
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tagcgaaaac
tRNA gene sequence 
GCCGCGGTGGTTTAGCCCGGTCAAGCGCAGGCCTCTCGAGCCCGTGACCCGGGTTCAAAT
CCCGGCCGCGGCACta
Downstream region at tRNA end position 
attttatgat
Secondary structure (Cloverleaf model)
>A17A001332	Glu	CTC
                   c      ACta attttatgat
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     A
    C       T T T G       C C G G G     C
    C       | | + |                 T T
    G       A A G C
      G T C        G     TGAC
                    C - G
                    A   C
                    G - C
                    G - C
                   *C - G
                  C       A
                  T       G
                    C T C
intron: position=32, length=17
ACCGAAAGAATGCGGGC
Intron
Comment/Decision
Genome/Seq. Info.-

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