The detailed information of tRNA gene sequence


Sequence ID>A17A001432
Genome IDCP012172
Search identical group
Phylum/ClassThermoproteota
SpeciesMetallosphaera sedula ARS50-1 [CP012172]
Start position on genome 1598334
End posion on genome 1598424
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gttataacgt
tRNA gene sequence 
GCCGCCGTAGCTCAGCCTGGCCAGAGCGCCGGACTCATACTCCGGTCGTCCGGGGTTCAA
ATCCCCGCGGCGGCACCA
Downstream region at tRNA end position 
tctccatgtg
Secondary structure (Cloverleaf model)
>A17A001432	Met	CAT
                   t      ACCA tctccatgtg
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C C G A        A      | | | | |     A
  T         C T C G       C G G G G     C
  G         | | | |                 T T
  G         G A G C
    C C A          G     TCGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C *
                  T       A
                    C A T
intron: position=39, length=13 (in A-loop)
GGATGCTGGGTCA
Intron
Comment/Decision
Genome/Seq. Info.-

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