The detailed information of tRNA gene sequence


Sequence ID>A17A001499
Genome IDCP014214
Search identical group
Phylum/ClassUnclassified
Speciesmethanogenic archaeon ISO4-H5 [CP014214]
Start position on genome 1610273
End posion on genome 1610384
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tccaaataat
tRNA gene sequence 
CCCCACTTAGCTCAGACTGGCTAGAGCGGCTGACTGTAAATCAGCAGGTCCCCTGTTCAA
ATCAGGGAGTGGGGACCA
Downstream region at tRNA end position 
ttattatcca
Secondary structure (Cloverleaf model)
>A17A001499	Tyr	GTA
                   t      ACCA ttattatcca
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T
                     C - G
                     T - A          T A
                    T     G G G A C     A
    C A G A        A      | | | | |     A
  T         C T C G       C C C T G     C
  G         | | | |                 T T
  G         G A G C
    C T A          G     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T*A
intron: position=36, length=34 (in A-loop)
AGAGTGTTCTCGGAGAGATCCGATACAGCCGCTG
Intron
Comment/Decision
Genome/Seq. Info.-

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