The detailed information of tRNA gene sequence


Sequence ID>A17A001529
Genome IDCP017006
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus sp. A20 [CP017006]
Start position on genome 266735
End posion on genome 266831
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tcactattaa
tRNA gene sequence 
GGGGCCGTAGTCTAGCTTGGACTAGGATGCCAGCCTGGAACGCTGGTGGTCCCGGGTTCA
AATCCCGGCGGCCCCAttt
Downstream region at tRNA end position 
accaatcata
Secondary structure (Cloverleaf model)
>A17A001529	Ser	GGA
                   a      Attt accaatcata
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    T C G A        A      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    A C T A        G     TGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G G*A
intron: position=36, length=21 (in A-loop)
GGATCTATTCCCCACCACCAG
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK