The detailed information of tRNA gene sequence


Sequence ID>A17A001692
Genome IDFN869859
Search identical group
Phylum/ClassThermoproteota
SpeciesThermoproteus tenax Kra 1 [FN869859]
Start position on genome 60067
End posion on genome 59972
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atttcttctt
tRNA gene sequence 
GCGGGGGTAGCTCAGCCTGGTTGGAGCGCCCAGCTCATAACCGGGAGGACCCGGGTTCAA
ATCCCGGCCCCCGCACtt
Downstream region at tRNA end position 
tcataacgtt
Secondary structure (Cloverleaf model)
>A17A001692	Met	CAT
                   t      ACtt tcataacgtt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T G          G     AGGAC
                    C - G
                    C - G
                    C - G
                    A   C
                   *G - C
                  C       A
                  T       A
                    C A T
intron: position=32, length=20
GGACGAAGTCCCGCGTATGG
Intron
Comment/Decision
Genome/Seq. Info.-

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