The detailed information of tRNA gene sequence


Sequence ID>A17A001862
Genome IDLT671858
Search identical group
Phylum/ClassUnclassified
SpeciesCuniculiplasma divulgatum S5(T) [LT671858]
Start position on genome 1165175
End posion on genome 1165280
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gggtattaaT
tRNA gene sequence 
CCCGACTTAGCTCAGCTGGTAGAGCGGCGGACTGTTAATCCGCAGGTCTCTGGTTCAAAT
CCGGAAGTCGGGATtt
Downstream region at tRNA end position 
agaatttgat
Secondary structure (Cloverleaf model)
>A17A001862	Asn	GTT
                   T      ATtt agaatttgat
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     T - A          T A
                    T     A G G C C     A
      C G A        A      | | + | |     A
    T       C T C G       T C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T*T
intron: position=36, length=31 (in A-loop)
AGAGGGAAAGTACGGCACGTAAATACCGCCG
Intron
Comment/Decision
Genome/Seq. Info.-

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