The detailed information of tRNA gene sequence


Sequence ID>A175000009
Genome IDCP000867
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanococcus maripaludis [CP000867]
Start position on genome 918345
End posion on genome 918256
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tttggttcgt
tRNA gene sequence 
GGCACGGGGTGCTTATCTTGGTAGATGAGGGCGGACTTCAGATCCGTCGAGTTCCGTCGG
AATTCGGGGTTCGATTCCCCCCCTGCGCCGttt
Downstream region at tRNA end position 
catatttttg
Secondary structure (Cloverleaf model)
>A175000009	SeC	TCA
                   t      Gttt catatttttg
                     G - C
                     G - C
                     C - G
                     A   C
                     C - G
                     G + T
                     G - C
                     G - C          T T
                    G     C C C C C     A
    T C T A        T        | | | |     G
  T         T T C G       C G G G G     C
  G           +                     T T
  G         T G A G
    T A G A        G     CGAGTTCCGTCGGAATT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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