The detailed information of tRNA gene sequence


Sequence ID>A178000008
Genome IDAP012489
Search identical group
Phylum/ClassThermoproteota
SpeciesAeropyrum camini SY1 = JCM 12091 [AP012489]
Start position on genome 959991
End posion on genome 960112
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
catccggagc
tRNA gene sequence 
GGGCCCGTAGCTCAGCCAGGACAGAGCGCCGGCCTTCTAAGCCGGTGGTCCCGGGTTCAA
ATCCCGGCGGGCCCGCCA
Downstream region at tRNA end position 
cacaacagcc
Secondary structure (Cloverleaf model)
>A178000008	Arg	TCT
                   c      GCCA cacaacagcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  A         C T C G       C C G G G     C
  G         | | | |                 T T
  G         G A G C
    A C A          G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A *
                    T C T
intron: position=38, length=44 (in A-loop)
AGCGCGGGGGGTCGGGAGAGCCCCTGTCTCTGCTGCGCGGGGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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