The detailed information of tRNA gene sequence


Sequence ID>A178000022
Genome IDCP001140
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus amylolyticus 1221n [CP001140]
Start position on genome 655532
End posion on genome 655639
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tacggtgaaT
tRNA gene sequence 
GGGGCCGTCGTCTAGCCTGGCTAGGATGCCGGCCTGGGGCGCCGGTGGTCCCGGGTTCAA
ATCCCGGCGGCCCCATta
Downstream region at tRNA end position 
attaaaaatt
Secondary structure (Cloverleaf model)
>A178000022	Pro	GGG
                   T      ATta attaaaaatt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        C      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | +                 T T
  G         G G A T
    C T A          G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       G *
                    G G G
intron: position=38, length=31 (in A-loop)
GGAGTACCCCCGTGGCCCAGGACTCCCGGAG
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK