The detailed information of tRNA gene sequence


Sequence ID>A178000026
Genome IDCP001140
Search identical group
Phylum/ClassThermoproteota
SpeciesDesulfurococcus amylolyticus 1221n [CP001140]
Start position on genome 1231174
End posion on genome 1231071
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aaataatgat
tRNA gene sequence 
GCCGGGGTAGCTCAGCTCGGTAGAGCGCCGGGCTGTTAACCCGGTGGTCCGGGGTTCGAG
TCCCCGCCCCGGCGCtg
Downstream region at tRNA end position 
ctcactgaat
Secondary structure (Cloverleaf model)
>A178000026	Asn	GTT
                   t      GCtg ctcactgaat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     G C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       C G G G G     C
    C       | | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A *
                    G T T
intron: position=38, length=29 (in A-loop)
ACCGCTTAAGCGAGAAGCCTGGTGCGGAA
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK