The detailed information of tRNA gene sequence


Sequence ID>A178000042
Genome IDCP001400
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfolobus islandicus M.14.25 [CP001400]
Start position on genome 1184458
End posion on genome 1184358
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position
tttaaaatgT
tRNA gene sequence
GCGGGGGTGCCCGAGCTGGTCAAAGGGGGCGGACTCAAGATCCGCTGGCGAAGGCCTTCG
CGGGTTCAAATCCCGTCCCCCGCATac
Downstream region at tRNA end position
atttcctcaa
Secondary structure (Cloverleaf model)
>A178000042	Leu	CAA
                   T      ATac atttcctcaa
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
    T C G A        G      + | | | |     A
  G         G C C C       G C G G G     C
  G           | | |                 T T
  T         A G G G
    C A A          G     TGGCGAAGGCCTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    C A A
intron: position=38, length=15 (in A-loop)
ACCCTTTAGTAAGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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