The detailed information of tRNA gene sequence


Sequence ID>A178000101
Genome IDCP001742
Search identical group
Phylum/ClassThermoproteota
SpeciesAcidilobus saccharovorans 345-15 [CP001742]
Start position on genome 1115779
End posion on genome 1115674
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position
gaggtatggt
tRNA gene sequence
GGGGCCGTCGTCTAGCCTGGTAGGATGCCAGCCTGGGGCGCTGGTGGTCCGGGGTTCAAA
TCCCCGCGGCCCCACCA
Downstream region at tRNA end position
ctctcttcaa
Secondary structure (Cloverleaf model)
>A178000101	Pro	GGG
                   t      ACCA ctctcttcaa
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
      C G A        C      | | | | |     A
    C       T C T G       C G G G G     C
    T       + | | +                 T T
    G       G G A T
      G T A        G     TGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       G *
                    G G G
intron: position=38, length=29 (in A-loop)
AGCGGACCCCCATGCCAGGCCGCCTAGAT
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK